Shan Shan

Publications

1. Diffusion Maps: Using the Semigroup Property for Parameter Tuning.
   Shan, S. & Daubechies, I. (2023).
   Theoretical Physics, Wavelets, Analysis, Genomics. Springer, 409-424.
   [paper]
   

2. Performance of Enhanced Liver Fibrosis test, FIB-4, and NAFLD fibrosis score in a screening study of 3,387 participants.
   Kjaergaard, M., Lindvig, K., Thorhauge, K., Andersen, P., Hansen, J., Kastrup, N., Jensen, J., Hansen, C., Johansen, S., Israelsen, M., Torp, N., Trelle, M., Shan, S., Detlefsen, S., Antonsen, S., Andersen, J., Graupera, I., Ginés, P., Thiele, M. & Krag, A. (2023).
   Journal of Hepatology. 79, 2, 277-286.
   [paper]
   

3. Examining the shape and size of female and male genitalia in snakes using three-dimensional geometric morphometrics.
   Granados, G., Greenwood, J., Secor, S., Shan, S., Hedrick, B., & Brennan, P. (2022).
   Biological Journal of the Linnean Society, 136.3, 466-476.
   [paper]
   

4. SlicerMorph: An open and extensible platform to retrieve, visualize and analyse 3D morphology.
   Rolfe, S., Pieper, S., Porto, A., Diamond, K., Winchester, J., Shan, S., Kirveslahti, H., Boyer, D., Summers, A., & Maga, M. (2021).
   Methods in Ecology and Evolution, 12, 1816-1825.
   [paper]

5. Insights from macroevolutionary modelling and ancestral state reconstruction into the radiation and historical dietary ecology of Lemuriformes (Primates, Mammalia).
   Fulwood, E., Shan, S., Winchester, J., Kirveslahti, H., Ravier, R., Kovalsky, S., Daubechies, I., & Boyer, D. (2020).
   BMC ecology and evolution, 21(1), 1-13.
   [paper]

6. Dietary adaptation in lemurs, analyzed using new approaches to describing functional properties of tooth shape.
   Fulwood, E., Shan, S., Winchester, J., Kirveslahti, H., Gao, T., Boyer, D., & Daubechies, I.
   The FASEB Journal, 34(S1), 1-1. (2020)
   [paper]
   

7. ariaDNE: A robustly implemented algorithm for Dirichlet energy of the normal.
   Shan, S., Kovalsky, S., Winchester, J., Boyer, D., & Daubechies, I. (2019).
   Methods in Ecology and Evolution, 10(4), 541-552.
   [paper], [code]